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Name: Nicolas Chiaruttini
Type: User
Company: EPFL - SV - PTECH - BIOP
Bio: Working as an Bio-Image Analyst for the BioImaging and Optics Platform (BIOP) at EPFL
Location: Lausanne - CH
Name: Nicolas Chiaruttini
Type: User
Company: EPFL - SV - PTECH - BIOP
Bio: Working as an Bio-Image Analyst for the BioImaging and Optics Platform (BIOP) at EPFL
Location: Lausanne - CH
Java client for the Allen Bain RESTful API
How to use Aligning Big Brains and Atlases with Python
A collection of scripts for ABBA, Fiji and QuPath.
Bacteria segmentation and quantification with FIJI and ilastik
[Obsolete] Big Data Viewer Slicer. Commands to extract a user defined slice on BigDataViewer.
ImgLib2-based viewer for registered SPIM stacks and more
Tests of various projectors for BigDataViewer
Helpers to use BigDataViewer as a quick visualization tool in other projects.
Fiji plugins for starting BigDataViewer and exporting data.
ImgLib2/BDV implementation of Stitching for large datasets
A tool for manual pointwise deformable registration using bigdataviewer.
Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment. Bio-Formats is released under the GNU General Public License (GPL); commercial licenses are available from Glencoe Software.
This software is an online database to register chemicals products in a research lab. Very simple, user-friendly, and easy to maintain. Requires a server with Apache, Php and MySql. User identification can be made via LDAP or Shibboleth.
Matlab code for the control, recording and synchronization of several devices (pumps, camera, live trackers, micromanipulators).
COVID-19 Futures, Explained With Playable Simulations
A python package which aligns histology to the Allen Brain Atlas and Waxholm rat atlas using deep learning.
An ImageJ tool for object-based 3D co-localization and distance analysis.
Free-Form 2-Photon Patterning
fluids v.3
Javascript simulation of a freely jointed chain polymer (with inertia)
Simple ImageJ2 commands
Atlas display and registration tools
Various demos using imglib2 and bdv
New & Improved PerkinElmer Operetta Importer Script using BioFormats!
ImageJ plugins to run ilastik workflows
Data structures and I/O for meshes
ImageJ UI for Java Swing.
GitHub Pages for ImageJ
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.