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abf_explorer

A simple GUI to quickly visualize and explore axon binary format electrophysiology files

clj-abf

Clojure library for interacting with ABF files. Provide a functional interface for manipulating and analyzing them.

cookiecutter-lab-project

Modification of cookiecutter-data-science to organize PhD projects

cookiecutter-platformio-emacs

cookiecutter for arduino/teensy projects with platformIO and emacs

csnake

implement the classic snake game in C with SDL2

dotfiles

bootstrap my vim environment

emacs-config

My emacs config. init.el loads revised-init.elc where the emacs magic happens

excitable-axonal-domains-figures

Figure code, Fiji scripts, and utility scripts

excitable-axonal-domains-physiology

code for physiology analysis my main thesis publication

github-lab-setup

Presentation introducing the why, what, and basic usage of git and github for our lab.

ilastik.github.io

matplotlib_styles

editing and using personal matplotlib stylesheets

neuron_project

NEURON class project

next_image

a utility Fiji plugin to help with semi-automated image analysis

nkicg6.github.io

An example of building a static website with clojure

prql

PRQL is a modern language for transforming data — a simple, powerful, pipelined SQL replacement

python-image-analysis

A collection of resources and functions for performing image analysis and making figures in python.

terraform-provider-ansible

community terraform provider for ansible

tkabf_explorer

simple python tkinter gui for viewing and semi automated analysis of ABF physiology files