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asciigenome

Text Only Genome Viewer!

basenji

Sequential regulatory activity predictions with deep convolutional neural networks.

cri_project

deseq2_tutorials

This repo contains files and codes related to bulk tissue RNAseq analysis using DESeq2 package.

faiz_strokeproject

Files associated with single-cell and spatial transcriptomic data analysis of Faiz_Stroke_Project

genome-wide-changes-in-lncrna-alternative-splicing-and-cortical-patterning-in-autism

Human Postmortem ASD RNA-seq Analysis Parikshak et al 2016

gsea_project

gtex_project_gea

This repo is under construction...

gwa_tutorial

A comprehensive tutorial about GWAS and PRS

harvardxcourse

Introduction to Linear Models and Matrix Algebra Course by Rafael Irizarry and Michael Love. http://genomicsclass.github.io/book/

km2gcn

Optimization process of WGCNA hierarchical clustering with k-means

rba_project

This repo contains descriptions and codes related to RB analysis.

rctp

rCTP calculations

staarpipeline-tutorial

The tutorial for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVORannotator, STAARpipeline and STAARpipelineSummary

swirl_courses

:mortar_board: A collection of interactive courses for the swirl R package.

synapse

visium_10xchromium_evdisco

analysis of combined Visium, 10X Chromium and evDISCO data from stroked mouse brain

wgcna

This repo contains files associated with weighted gene correlation network analysis (WGCNA) on "Common Mind Consortium (CMC)" datasets.

within_subject

Codes for Within Subject Memory Encoding project