GithubHelp home page GithubHelp logo

Comments (3)

wleoncio avatar wleoncio commented on June 23, 2024

@SystemsBiologist

Could you change the code after you bring back dev to work?

Sure thing, but what do you mean about dev not working?

Edit: pasting e-mail reply:

The dev is working fine the problem was from binder.
Now everything is working for all organisms except for two functions:
DEGanalysis2clust()
DEGanalysis()
You can see that in the "DIscBIO-CONQUER Notebook": https://github.com/ocbe-uio/DIscBIO/blob/dev/notebook/DIscBIO-CONQUER%20Notebook.ipynb
The ClustDiffGenes() is working although the output does not show the gene symbol name but that is fine. It would be great if we can do in the future the same for DEGanalysis2clust() and DEGanalysis().

from discbio.

wleoncio avatar wleoncio commented on June 23, 2024

@SystemsBiologist, it looks like commit c9313b5 has already implemented the changes in the OP, should this issue be closed then? What about the problems posted, i.e.:

The problem will be in 3 functions (DEGanalysis2clust, DEGanalysis and ClustDiffGenes)
The outcome of ClustDiffGenes() is not perfect but it is OK
The main problem is in DEGanalysis2clust and DEGanalysis. They are not working at all.

from discbio.

SystemsBiologist avatar SystemsBiologist commented on June 23, 2024

You can close this one since you have created a "To do list"

from discbio.

Related Issues (20)

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.