oma219 Goto Github PK
Name: Omar Ahmed
Type: User
Company: Johns Hopkins University
Twitter: oyfahmed
Location: Allentown, PA
Omar Ahmed's Projects
big-bwt
modified from gitlab.com/manzai/Big-BWT to support fasta files
bioconda-recipes
Conda recipes for the bioconda channel.
cliffy
16S rRNA read classification using compressed document listing
cliffy-experiments
Experiments for Cliffy Software Tool
digest
docprof-experiments
Experiments related to document array profiles data-structure
genome_info_curve
Genome Utility
gsa-is
Inducing enhanced suffix arrays for string collections [DCC'16, TCS 2017]
khoice
k-mer length analysis
klib
A standalone and lightweight C library
microbemixer
16S rRNA Read Dataset Simulator
moni
MONI: A Pangenomic Index for Finding MEMs
oma219.github.io
Personal Website
pacsketch
Network Anomaly Detection Using Probabilistic Data Structures
pfp-thresholds
Computing thresholds from Prefix-free parsing
r-index
An optimal space run-length Burrows-Wheeler transform full-text index
spumoni
Pan-Genomic Matching Statistics
spumoni-experiments
Experiments related to SPUMONI
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