orionisbio Goto Github PK

awesome-production-machine-learning

A curated list of awesome open source libraries to deploy, monitor, version and scale your machine learning

cg-schnet

cG-SchNet - a conditional generative neural network for 3d molecular structures

chemiscope

An interactive structure/property explorer for materials and molecules

django-auth-ldap

Django authentication backend that authenticates against an LDAP service.

docker-rabbitmq-example

Creates a custom RabbitMQ container with a preconfigured vhost (example-vhost), exchange (example-exchange), and queue (example-queue) with appropriate bindings therein.

flower

Real-time monitor and web admin for Celery distributed task queue

fragmenstein

Scaffold hopping between bound compounds by stitching them together like a reanimated corpse.

gitpython

GitPython is a python library used to interact with Git repositories.

goofys

a high-performance, POSIX-ish Amazon S3 file system written in Go

hr_test_one

hr_test_x

ipymonaco

A Jupyter widget that renders the Microsoft's Monaco text editor inline within the notebook.

jdk-mvn-py3-vnc

Java 8 JDK + Maven 3 + Python 3 + NodeJS V4 + NPM 3 + Gradle 5 VNC/noVNC-based Docker Desktop

knime-vnc-docker

KNIME Analytics Platform in Docker with VNC for Kubernetes, Openshift, DC/OS, Container Cloud Platforms

lightgbm

A fast, distributed, high performance gradient boosting (GBT, GBDT, GBRT, GBM or MART) framework based on decision tree algorithms, used for ranking, classification and many other machine learning tasks.

luigi

Luigi is a Python module that helps you build complex pipelines of batch jobs. It handles dependency resolution, workflow management, visualization etc. It also comes with Hadoop support built in.

meg

Molecular Explanation Generator

mol2vec

Mol2vec - an unsupervised machine learning approach to learn vector representations of molecular substructures

mordred

a molecular descriptor calculator

msabrowser

🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations

multipy

Multiple hypothesis testing in Python

notebooktoall

The coolest way to turn a Jupyter Notebook into sharable stuff.

plotly.py

The interactive graphing library for Python (includes Plotly Express) :sparkles:

psutil

Cross-platform lib for process and system monitoring in Python

pymol-open-source

Open-source foundation of the user-sponsored PyMOL molecular visualization system.

pyrmsd

pyRMSD is a small Python package that aims to offer an integrative and efficient way of performing RMSD calculations of large sets of structures. It is specially tuned to do fast collective RMSD calculations, as pairwise RMSD matrices.

python-egnyte

Python client for the Egnyte Public API.

qgrid

An interactive grid for sorting, filtering, and editing DataFrames in Jupyter notebooks

resources

A Highly Opinionated List of Open Source Cheminformatics Resources

seqviz

DNA sequence viewer supporting custom, GenBank, FASTA, NCBI accession, and iGEM input.