Comments (2)
Hi Xu Cai,
If you only received a couple of such errors and the program produces intact LTR-RTs, as indicated in your standard output, you should be fine. This is likely the case that a small number of candidates are located at the boundary of contigs, such that no flanking sequence is available for the extraction. Missing these candidates will not produce significant bias. I will further work on a solution for this.
Thanks,
Shujun
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Many thanks.
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