padillacoreanolab Goto Github PK

alphatracker

AlphaTracker is a computer vision pipeline with the practical and real-time advantages , which requires minimal hardware requirements and produces reliable tracking of multiple unmarked animals. An easy-to-use user interface further enables manual inspection and curation of results.

behavioral_dataframe_processing

diff_fam_social_memory_ephys

dominance_strain_comparison

example_notebook

This is just an example of how we share code in notebook format with one another.

extracellular_ephys_analysis

eztrack

Free, platform independent, behavior tracking software.

literature_review_processing

med-pc

med_pc_repo

ml_behavioral_quantification

Using Machine Learning to predict the outcome of a reward competition from body parts' location in mouse behavioral data

nose_poke_identifier

padillacoreanolab

Config files for my GitHub profile.

pc_mouse_party_app

pc_mouse_party_code

pc_mouseparty

Package to maintain code for Padilla-Coreano Lab.

phy2_shortcuts

pose_tracking_repo

reward_comp_ext

reward_competition_ephys_analysis_with_omission_and_divider_controls

reward_competition_extention

side_bias_analysis

sleap

A deep learning framework for multi-animal pose tracking.

sleap_data

Scripts and commands to run SLEAP for animal pose estimtion

sleap_workshop

Workshop on how to use SLEAP for Animal Pose Estimation

sociability_hierarchy_repo

social-neuro-modeling

social_competiton_elo_rating

social_dominance_active_inference

spikesort_docker

A repo that contains all the code and guides for doing basic spike sorting in a containerized webapp using docker.