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action-gh-release

📦 :octocat: GitHub Action for creating GitHub Releases

binder-modian

bioasp.github.io

Website for the BioASP software collection

boolean.py

Implements boolean algebra in one module.

caspots

Boolean network inference from time series data with perturbations

clockcycle-notebooks

Notebooks for qualitative analysis of Circadian Clock - Cell Cycle coupled SBGN-PD maps

codimd

CodiMD - Realtime collaborative markdown notes on all platforms.

colomoto.github.io

The colomoto website

csbgnpy

docker-mtga

Dockerized Magic the Gathering: Arena

docker-mtgo

Docker image with ready-to-play MTGO (Magic Online) for Linux and macOS

docker-wine-wow64

Dockerized WineHQ with WOW64 support

dockerized-lutris

Development at: https://chaos.expert/agowa338-docker/dockerized-lutris

donodo

Bridging Docker images with Zenodo

igotu2gpx

igotu2gpx clone from https://launchpad.net/igotu2gpx

inkslides

A rewrite of the inkscapeslide script to create PDF presentations out of inkscape SVG files.

kappa

A domain-specific language that allows the expression or protein interactions that can be used to build executable models.

libsbml-plus-packages

Conda recipe for libsbml with all packages

maboss-env-2.0

MaBoSS is a C++ software for simulating continuous/discrete time Markov processes, applied on a Boolean network.

mopidy-cd

A plugin for mopidy for playing music from CD

mpbns-si-notebooks

mpd-dynamic

Dynamic playlists for MPD using Spotify and LastFM

pint

Static analyzer for dynamics of Automata Networks

pyboolnet

PyBoolNet is a Python package for the generation, modification and analysis of Boolean networks.

pypint

Python interface to Pint

sbgnpd2an-suppl

Supplementary material of the BMC Systems Biology paper on SBGN-PD to Automata Networks

text

📑 Collaborative document editing using Markdown

thunderlink

Link to your Thunderbird emails!

unicodeit

Converts LaTeX tags to unicode: \mathcal{H} → ℋ. Available on the web or as Automator script for the Mac.

updating-modes-notebooks

Notebooks demonstrating colomoto.minibn for computing dynamics of Boolean networks with various update modes