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arabidopsis

bionode

Modular and universal bioinformatics

cell_lineage

Studying the dynamics of cell position in C. Elegans early embryogenesis

data-fusion

This repository contains the MATLAB library implementing the data fusion algorithm. It is associated to the article "Synthesizing developmental trajectories", Villoutreix P., Andén J., et al., 2017.

data-fusion-images

data-fusion-output

eggchambers

growth_plate

This repository contains the Matlab scripts used to generate 3D Maps of the growth plates.

immersed_in_embryogenesis

Visualizing multimodal 3D + time microscopy images in a VR space

ml_in_genomics

montreal

msl-gantt

[project] gantt chart for msl

nested_genes

paulvill.github.io

The Embryo Digital Atlas is an open-source project aiming at building a web based platform to visualize complex experimental datasets in an easy and beautiful way.

plrnaseq

sea-urchin

This code is associated to the publication "An integrated modelling framework from cells to organism based on a cohort of digital embryos" - http://www.nature.com/articles/srep37438

sncf

predicting train station crowding

spatio-temporal-transcriptomics

the-method.github.io

This is the code for The Method's website.

three.js

JavaScript 3D library.

tiff-js

A JavaScript-based parser for the TIFF image format.

wow-2017

Mozilla Science Lab's Working Open Workshops in 2017