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ablationplanner

bootcampsandbox

Repository for free experimentation with github

breastreconstruction

Tool for breast reconstruction surgery planning

breasttumordetection

cars2019tutorial

Hands on tutorial for SlicerIGT at CARS 2019. SlicerIGT home page: http://www.slicerigt.org/wp/

coloncurvature

A set of tools to analyze the curvature of colon segmentations.

depthimagetopointcloud

This repo contains a slicer module for generating point clouds from static or streamed depth images.

hololensquicknav

lumbartutor

lumpnavreplay

Tools for analyzing Navigated Lumpectomy data

mirrorredsurfacedistance

nephrostomytutor

openigtlinkunity

operationpig

Instructions for setting up 3D Slicer based "Operation" game for outreach events for kids

perklabbootcamp

Materials for the yearly PerkLab bootcamp course

polyseg

Library for polymorph segmentation representation for medical image computing

prostatebiopsysim

TRUS and prostate biopsy training simulator

prostatezoneoverlay

segmentationcomparison

skullregistration

Tracked ultrasound to make skull registration more accurate.

slicerfreesurfer

This repository contains the SlicerFreeSurferImporter extension for 3D Slicer. The extension implements a module for importing models, scalar overlays, and segmentations from FreeSurfer, as well as handling the transformation of models from FreeSurfer to Slicer coordinates.

slicermatlabbridge

MatlabBridge extension for 3D Slicer

sliceropenanatomy

3D Slicer extension for exporting Slicer scenes to use in the OpenAnatomy.org browser

slicersandbox

Collection of utilities that are not polished implementations but can be useful to users

slicerskinmouldgenerator

3D Slicer extension for generating 3D-printable skin moulds for radiation therapy

slicervolumeclip

3D Slicer extension for clipping volume with surface or ROI box

spectroscopy_trackedtissuesensing

Codebase for the project titled "Development of a research testbed for intraoperative optical spectroscopy tumour margin assessment" conducted by David Morton 2021-2023.

spineguidance

Spinal needle guidance based on ultrasound imaging

trus_trainer