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Phelim Bradley's Projects

bigsi icon bigsi

BItsliced Genomic Signature Index - Efficient indexing and search in very large collections of WGS data

ga4gh-mongo icon ga4gh-mongo

A document based Variant database schema inspired by ga4gh Variants schema.

mantis icon mantis

Mantis: A Fast, Small, and Exact Large-Scale Sequence-Search Index

mccortex icon mccortex

Cortex on steroids: for larger populations with better assembly

metasort icon metasort

A Digital Health Hack Weekend Project using OneCodex API. Filter reads based on taxonomy assignment from OneCodex.

pyseqfile icon pyseqfile

Fast parsing of multiple sequence file formats using seq_file

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