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pierremurchan's Projects

lactater icon lactater

Tools for analyzing lactate thresholds from a step incremental test to exhaustion 📈

py-wsi icon py-wsi

Python package for dealing with whole slide images (.svs) for machine learning, particularly for fast prototyping. Includes patch sampling and storing using OpenSlide. Patches may be stored in LMDB, HDF5 files, or to disk. It is highly recommended to fork and download this repository so that personal customisations can be made for your work.

pycombat icon pycombat

pyComBat is a Python 3 implementation of ComBat, one of the most widely used tool for correcting technical biases, called batch effects, in microarray expression data.

smmip-pipeline icon smmip-pipeline

Pipeline for processing and analysing single-molecule molecular inversion probes data.

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