Comments (3)
You are right, something is going wrong with output from the website. I will work on that next week.
Thanks !
Le 2 sept. 2016 à 18:43, Bryan Ellerbrock [email protected] a écrit :
format of traits and variables in cropontology.org obo download (http://www.cropontology.org/obo/CO_331):
[Term]
id: CO_331:0000069
name: Storage Root Shape (primary)
namespace: Sweet PotatoTrait
def: "undefined" []
namespace: Sweet PotatoScale
relationship: scale_of CO_331:Morphological%20trait[Term]
id: CO_331:0000774
name: RtShpP_Et_1to8
synonym: "RTSHP1" EXACT []
namespace: SweetpotatoVariable
relationship: variable_of CO_331:0000069format needed for sweetpotatobase (and other sgn databases):
[Term]
id: CO_331:0000069
name: Storage Root Shape (primary)
namespace: SweetpotatoTrait
def: "Storage Root Shape described from longitudinal sections made about the middle of freshly harvested storage roots" [Huaman1991:Def_4.2.1]
comment: | Entity: Root | Attribute: Shape | Trait status: Recommended.
synonym: "RtShpP" EXACT []
is_a: CO_331:0000002 ! Morphological trait[Term]
id: CO_331:0000774
name: Storage Root Shape primary estimating 1-8
namespace: SweetpotatoTrait
def: "Storage Root Shape described from longitudinal sections made about the middle of freshly harvested storage roots" [Huaman1991:Def_4.2.1]
synonym: "RTSHP1" EXACT []
synonym: "RtShpP_Et_1to8" EXACT []
relationship: variable_of CO_331:0000069 ! Storage Root Shape (primary)—
You are receiving this because you are subscribed to this thread.
Reply to this email directly, view it on GitHub, or mute the thread.
from co_331-sweetpotato-traits.
@marieALaporte great, thanks! Updating the .obo output format would be a big help, and not just for sweetpotatobase.
Also, is there any procedure in place for small fixes to the ontology displayed on cropontology.org?
I've come across a few miss-spellings and misplaced characteristics. For example the morphological trait
Storage Root Attachement
is spelled wrong, and the biochemical trait Asparagine content
has an incorrect trait description - it's displaying the description for Peonidin content
.
from co_331-sweetpotato-traits.
@bellerbrock I am closing the issue as I think this has been resolved. Reopen it if it is not.
from co_331-sweetpotato-traits.
Related Issues (20)
- incomplete variables
- Create: Storage Root Firmness HOT 1
- Update: CO_331:2000013 (Plant earliness estimating 1-3)
- Trait class 'Harvest trait'
- Create: Boiled storage root dry matter content
- Add compiled quality traits HOT 1
- Create: TEST: Boiled sweet potato surface orange colour intensity
- Create: test
- duplicated IDs HOT 4
- correct method_of relationship for obsolete term CO_331:2000035
- CO_331:0000681 and CO_331:0000296 confounding HOT 1
- CO_331:0000220 and CO_331:0000218 are the same HOT 2
- CO_331:0000679 and CO_331:0000304 are the same HOT 2
- CO_331:0000678 and CO_331:0000303 are the same HOT 2
- CO_331:0000211 and CO_331:0000208 are the same HOT 3
- CO_331:0000230 per sowed or harvested plant?
- Sugars and protein, % over dry or fresh weight?
- missing term: CO_331:00001124 HOT 1
- duplicated IDs HOT 1
- add test before release
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from co_331-sweetpotato-traits.