CO_331:0000218 id is duplicated about co_331-sweetpotato-traits

[jaiswalp]

@elizabetharnaud @marieALaporte @cooperl09 Please check.

[cooperl09]

That ID is not in the the sweet potato ontology file which is in this repository. It looks like it was updated on the https://sweetpotatobase.org/ site in Sept. 2016. The files here have not been updated since Nov. 2015.

[jaiswalp]

This is interesting. Idea was to have all the edits recorded using the version control. Please confirm.

[bellerbrock]

@cooperl09 Right, the files on the master branch here haven't been updated since last fall. Maybe @c5sire or @omarbenites can push the edits and updates?

[cooperl09]

OK, That would be good. I can help if there are issues, or @marieALaporte could upload it as well.

[bellerbrock]

Ok, thanks. For background, to my knowledge the latest version was released in June 2016 on cropontology.org. There is a TraitDictionary file of that release that @c5sire sent me stored here in the sweetpotatobase branch. In September I converted it to .obo format with @marieALaporte in order to load it into sweetpotatobase. Problems like this showed up during that process, and new traits have been requested since. I don't know if this is the appropriate forum, but I thought I should at least track the issues somewhere where others can see!

[jaiswalp]

This is the right forum as we build resources.

Pankaj

On 11/17/2016 11:44 AM, Bryan Ellerbrock wrote:

Ok, thanks. For background, to my knowledge the latest version was
released in June 2016 on cropontology.org. There is a TraitDictionary
file of that release that @c5sire https://github.com/c5sire sent me
stored here in the sweetpotatobase branch. In September I converted it
to .obo format with @marieALaporte https://github.com/marieALaporte
in order to load it into sweetpotatobase. Problems like this showed up
during that process, and new traits have been requested since. I don't
know if this is the appropriate forum, but I thought I should at least
track the issues somewhere where others can see!

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Pankaj Jaiswal, PhD
ICBO 2016 Conference Chair
Associate Professor
Oregon State University
Department of Botany and Plant Pathology
2082 Cordley Hall
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email: [email protected]

[bellerbrock]

Fixed this is the working obo file by readding Storage root total marketable yield weight computation tons per ha with a different id. And closing it now as we're making the working obo file the new master file.