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Peter Mahoney's Projects

ecoapps_extinctionvortex_data icon ecoapps_extinctionvortex_data

The data used to evaluate extinction vortex dynamics in isolated populations of Puma concolor. For a publication citation, see:

puma_ibm icon puma_ibm

An individual-based genetic model used to assess genetic degradation in an isolated puma population. Used in the following manuscript: http://rspb.royalsocietypublishing.org/content/283/1837/20160957.

slurm-examples icon slurm-examples

"Examples of using slurm in life sciences workflows using posix file systems and object storage" FredHutch. I only slightly modified the code from FredHutch to allow for data inputs, run multiple models, and merge model output. See internal files in the centipede folder.

spatialcongruence_coyotedeer icon spatialcongruence_coyotedeer

Data and code used in: Mahoney et al. 2018. Spatial processes decouple management from objectives in a heterogeneous landscape: predator control as a case study. Ecological Applications.

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