pnlbwh Goto Github PK
Name: Psychiatry Neuroimaging Lab @ BWH/HMS
Type: Organization
Bio: Psychiatry Neuroimaging Lab at Brigham and Women's Hospital and Harvard Medical School
Location: Boston, MA
Name: Psychiatry Neuroimaging Lab @ BWH/HMS
Type: Organization
Bio: Psychiatry Neuroimaging Lab at Brigham and Women's Hospital and Harvard Medical School
Location: Boston, MA
A suite of tools for medical image processing focused on brain analysis
Submodule for pnlpipe and pnlNipype software installation
CNN based brain masking
Various mri conversion/modification scripts
A lightweight dashboard for monitoring project progress
Log disk usage automatically
Multi-site dMRI harmonization
Visualize extra information from FSL 6.0.1 eddy outputs
Interactive analysis of FreeSurfer statistics using https://plotly.com/dash/
Experimental fsl containers for learning purpose, consult fsl license at https://fsl.fmrib.ox.ac.uk/fsl/fslwiki/Licence
Processing pipelines for the HCP
MRI brain extraction tool
NIFTI pipeline glued together using Luigi
MK-Curve PNL documentation
Combining diffusion MRI and MRS
Harmonization of multi-shell diffusion MRI, an enhancement of https://github.com/pnlbwh/dMRIharmonization
Takes snapshot of Nifti images
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