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Name: Pittsburgh Supercomputing Center
Type: Organization
Bio: PSC Collaborative and Open Source Projects
Location: Pittsburgh, PA
Blog: https://www.psc.edu
Name: Pittsburgh Supercomputing Center
Type: Organization
Bio: PSC Collaborative and Open Source Projects
Location: Pittsburgh, PA
Blog: https://www.psc.edu
The MEME Suite allows you to discover novel motifs in collections of unaligned nucleotide or protein sequences, and to perform a wide variety of other motif-based analyses.
METHYLPY, is an analysis pipeline for DNA methylation data.
ncdu is a disk utility for Unix systems
ncview is a visual browser for netCDF format files.
GNU Octave is software featuring a high-level programming language, primarily intended for numerical computations
Prose diffs for any document format supported by Pandoc
Pandoc is a free and open-source document converter, widely used as a writing tool and as a basis for publishing workflows.
PHYLIP is a free package of programs for inferring phylogenies.
Picard is a set of command line tools for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.
Fast, reliable protein-coding gene prediction for prokaryotic genomes.
Prokka: rapid prokaryotic genome annotation.
Raw format to OME-TIFF converter.
RAxML - Randomized Axelerated Maximum Likelihood.
Rclone is a command line program to manage files on cloud storage. It is a feature rich alternative to cloud vendors' web storage interfaces.
Build amazing TUIs (Text User Interfaces) with this innovative Python framework.
🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
Samtools is a suite of programs for interacting with high-throughput sequencing data.
ShellCheck, a static analysis tool for shell scripts
SPAdes – St. Petersburg genome assembler – is intended for both standard isolates and single-cell MDA bacteria assemblies.
Magic-BLAST is a tool for mapping large next-generation RNA or DNA sequencing runs against a whole genome or transcriptome.
Spliced Transcripts Alignment to a Reference.
STAR-Fusion is a component of the Trinity Cancer Transcriptome Analysis Toolkit (CTAT).
Target/Integrative Genetic Element Retriever
Count your code, quickly.
Trimmomatic performs a variety of useful trimming tasks for illumina paired-end and single ended data
Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms
The ViennaRNA Package consists of a C code library and several stand-alone programs for the prediction and comparison of RNA secondary structures.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.