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amp_classify_zdd

awesome-deepbio

A curated list of awesome deep learning applications in the field of computational biology

bacteriocin_paper

All the notebooks and files for the bacteriocin prediction paper

cnn-for-sentence-classification-in-keras

Convolutional Neural Networks for Sentence Classification in Keras

cnn-text-classification

Text classification with Convolution Neural Networks on Yelp, IMDB & sentence polarity dataset v1.0

code-of-learn-deep-learning-with-pytorch

This is code of book "Learn Deep Learning with PyTorch"

condo

protein domain boundary prediction

danq

A hybrid convolutional and recurrent neural network for predicting the function of DNA sequences

deep-review

A collaboratively written review paper on deep learning, genomics, and precision medicine

deepbind

Training and testing of DeepBind models.

deepbind-with-pytorch

PyTorch implementation of a DeepBind model

deepfam

Deep learning based alignment-free method for protein family modeling and prediction

deeplearning-biology

A list of deep learning implementations in biology

deeplearning-util

deeplearningsandbox

Blog related code for

deepvariant

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

examples

A set of examples around pytorch in Vision, Text, Reinforcement Learning, etc.

focal_loss_multi_class

mutil-class focal loss implemented in keras

keras-attention-mechanism

Attention mechanism Implementation for Keras.

keras-cn

Chinese keras documents with more examples, explanations and tips.

keras-vis

Neural network visualization toolkit for keras

lasagne4bio

neubi

Neural Bacteriocin Identifier - a recurrent neural network based software to predict bacteriocins from protein sequences.

off_target_prediction

practical-pytorch

PyTorch tutorials demonstrating modern techniques with readable code

pytorch-cifar

95.16% on CIFAR10 with PyTorch

pytorch-cifar-models

3.41% and 17.11% error on CIFAR-10 and CIFAR-100

pytorch-cortexnet

PyTorch implementation of the CortexNet predictive model

pytorch_resnet_cifar10

Proper implementation of ResNet-s for CIFAR10/100 in pytorch that matches description of the original paper.

resnet20-cifar-10

ResNet20, CIFAR-10,