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cardio_cell

Automatic cardio cells counter

cellservice

An open-source platform for analyzing biological RGB images.

covid19-intensity-labeling

Code for COVID19 CT labeling. Submillimetric CT dataset provided as well.

darts

Code for DARTS: DenseUnet-based Automatic Rapid Tool for brain Segmentation

extensionsindex

Slicer extensions index

landmarkregistration

An interactive registration tool that manages viewing and manipulating of sets of fiducials

mabs_qc

Registration quality check tool for Plastimatch implementation of Multi Atlas Based Segmentation

mabs_stats

This script analyzes the seg_dice.csv mabs file and compute statistic on it.

mabs_test_script

This is a Python script to run automatic tests on Plastimatch mabs (www.plastimatch.org)

monai

AI Toolkit for Healthcare Imaging

needle_tip_detection

pfm_tools

This repository contains Python files to menage the I/O of pfm files (www.plastimatch.org)

plastimatchslicerpy

Use Plastimatch as Python module from Slicer environment

pydicom

Read, modify and write DICOM files with python code

python-mha

Read and write mha files using Python

slicer-deepinfer

3D Slicer Module for connecting to model repository and use models for image analysis.

slicerarduinocontroller

Extension for 3D Slicer that allows connecting and receiving/sending data from/to Arduino boards

slicerbrainlesaurora

Use Brainles Aurora into 3D Slicer

slicercbcttoothsegmentation

Slicer extension for automated segmentation of individual teeth in cone-beam CT dental scans using a deep-learning based approach.

slicerdensitylungsegmentation

Extension for 3D Slicer that labels lung tissue according to density

slicerimagecompare

This extension executes synthetic CT conversion accuracy

slicermeshvolumecomparison

strumentazione_20-21_arduino

strumentazione_22-23

strumentazionebiomedica21-22