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Name: Alvin Qin
Type: User
Company: Broad Institute
Bio: Lead Computational Biologist
Location: US
Name: Alvin Qin
Type: User
Company: Broad Institute
Bio: Lead Computational Biologist
Location: US
Cell type specific enhancer-gene predictions using ABC model (Fulco, Nasser et al, Nature Genetics 2019)
Alignment, quantification and fusion prediction from long RNA reads
Advanced Normalization Tools in Python
ENCODE ATAC-seq pipeline
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
A framework for data augmentation for 2D and 3D image classification and segmentation
Conda recipes for the bioconda channel.
Butler is a framework for running scientific workflows on public and academic clouds.
Cromwell/WDL wrapper for Python
dalmatian is a collection of high-level companion functions for Firecloud and FISS.
Genepy is an open source utils package covering a range of useful functions for large scale genomics data analysis in python
An experimental language for causal reasoning
for processing tcga data
This is the Rust course used by the Android team at Google. It provides you the material to quickly teach Rust to everyone.
cosmic category to genomic format
Mutation detection using GATK4 best practices and latest RNA editing filters resources. Works with both Hg38 and Hg19
datasets to genes
《动手学深度学习》
The Leek group guide to data sharing
Modeling Latent Flow Structure using Hodge Decomposition
What you need to process the Quarterly DepMap-Omics releases from Terra
DoWhy is a Python library for causal inference that supports explicit modeling and testing of causal assumptions. DoWhy is based on a unified language for causal inference, combining causal graphical models and potential outcomes frameworks.
Open-source command-line tool to run batch computing tasks and workflows on backend services such as Google Cloud.
Emacs Python Development Environment
Get started DVC project
A set of examples around pytorch in Vision, Text, Reinforcement Learning, etc.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.