actions_example

An example repository for using GitHub Actions, particularly as a cluster

adventofcode

Repository for my solutions to advent of code

amr_data_prize

Repository for data prize code

covid_bed_occupancy

Code for bed occupancy and patient pathway analyses

covidregionaldata

Data extraction tools for the Covid-19 outbreak

ctcmodeler

Repository for contact network interventions paper

efficientspatial

[OBSOLETE; USE EPICSPATIAL INSTEAD] An epidemic modelling framework for all resolutions of gridded and polygon spatial data

epicspatial

An epidemic modelling framework for all resolutions of gridded and polygon spatial data

glass2022

Compiled data from the WHO GLASS 2022 report.

gosh_mrsa

Data and code repository for analysis of AMR dynamics at GOSH

hosp_covid

Hospital modelling for COVID19

hospital_model

"Individual patient" hospital model for covid19

mcmc_practice

An example repository to fit a model to data using mcmc

mrsa_phage_dynamics

mrsa_transduction

mwss-app

RRShiny application to run stochastic epidemiological simulations for nosocomial spread in structured healthcare settings

network_algorithm

Code repository for the paper "An algorithm to build synthetic temporal contact networks based on close-proximity interactions data"

nhs_pathways_report

Repository to compile the analysis report on potential COVID-19 symptoms reported through NHS Pathways

phage_antibiotic_dynamics

Repository for code and data on the joint impact of phage and antibiotics on bacteria

practice_repo

Practice repository to go over the basics of GitHub

projet_mesurs

Code repository for the mesurs group project

qleclerc

My personal website, adapted from the Academic Theme framework.

qleclerc.github.io

quentinlclrc

Personal website of Quentin Leclerc

rdots

Set of functions for the basic spatial simulation of an epidemic in a moving population

sismid-sbied

Repo for the code in the SBIED module (SISMID 2020)

spatial_phage

Set of functions to simulate spatial interactions of bacteria and phage