Name: RAW Lab
Type: User
Company: University of North Carolina at Charlotte
Bio: Dr. Richard Allen White III lab of computational and synthetic virology.
Our lab group is elucidating the largest genetic repository on planet the viruses.
Twitter: lab_raw
Location: 150 N Research Campus Dr, Kannapolis, NC 28081
Blog: www.rawlab.org
RAW Lab's Projects
An analysis and visualization platform for 'omics data
From Pre-print. ATLAS (Automatic Tool for Local Assembly Structures) - a comprehensive infrastructure for assembly, annotation, and genomic binning of metagenomic and metatranscriptomic data
Introduction of fundamentals of programming for bioinformatics (sometimes called βscriptingβ) using current programming languages and paradigms. Introduces both the language and the use of the language within a Unix environment, demonstrating how interpreted languages serve both as a useful tool for writing and testing programs interactively and as a powerful data analysis and processing tool for bioinformatics. Hands-on computing labs in which students learn bioinformatics computing and programming are also included.
Principles of Team Science at University of North Carolina at Charlotte
Principles of Team Science at University of North Carolina at Charlotte
Primer design from single genes to whole gene families for unlocking the tree of life
Detailed protocol for viral enumeration of aquatic ecosystems and modern microbialites
Metagenomics and metatranscriptomics workshop -Forestry and Agricultural Biotechnology Insititute (FABI), University of Pretoria, South Africa, 22-26 OctoberΒ 2018
MerCat: python code for versatile k-mer counting and diversity estimation for database independent property analysis for meta -ome data
MerCat2: python code for versatile k-mer counting and diversity estimation for database independent property analysis for metaome data
Python code for versatile Functional Ontology Assignments for Metagenomes searching via Hidden Markov Model (HMM) with environmental focus of shotgun metaomics data
Statistical package for metaome denovo assembly results.
Comprehensive database for diazotroph nitrogenases, alternative nitrogenases, and nitrogenase-like enzymes at the University of North Carolina at Charlotte (UNCC)
One liners and useful scripts for computational biology
Rhizosphere Hotspot data and scripts.