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aiptasia_salinity_thermotolerance_16s

alderdice_2021

anchor_spis_ltwarming_stcbass

bacteria_natcommun

Electronic notebook for "Naturally occurring fire coral clones demonstrate a genetic and environmental basis of microbiome composition" (Nat. Commun. 2021)

brightnessmenulet

BrightnessMenulet is an Mac OS X app that allows you to control display brightness via DDC/CI protocol

carradec_nanopore

The code associated with the nanopore vs illumina ITS2, 16S and 18S comparison

cbass-vs-rss-physiology

Electronic notebook for "Remarkably high and consistent tolerance of a Red Sea coral to acute and chronic thermal stress exposures" Limnology and Oceanography

cbass84

analysis workflow and scripts for CBASS84 manuscript

cbass_hypoxia

cbass_manual

cbass_microsensor_ros

cbass_reproducibilty_microbiomescreening_aiptasia

cbassed50

The CBASSED50 R package to process CBASS data

cbassvsclassic

Compared responses of coral holobiont to short term acute heat stress and long term heat stress

coracle

Machine Learning Framework to Identify Coral Bacteria Associated with Thermal Resilience

coral-bleaching-a-global-analysis-of-the-past-two-decades

coral_deoxygenation_rnaseq

coral_endoliths

coral_larvae_deoxygenation_rnaseq

coral_microbiome_transplants

globalsearch

gradient-physiology

Electronic notebook for "Empirically derived thermal thresholds of four coral species along the Red Sea using a portable and standardized experimental approach"

malaybleaching

pocillopora-verrucosa-genome

Describes the scripts and codes to assemble the transcriptome and genome of Pocillopora verrucosa

red-sea-radseq

red_sea_virome

This repository contains the scripts used to analyze data and create figures for the manuscript “Coral-associated viral assemblages from the central Red Sea align with host species and contribute to the holobiont’s bacterial virulence”

reefmapmaker

rossbach_2020

Figure creation script and associated data from Rossbach and Hume et al. 2020

symbiodiniaceae-in-juvenile-octocoral

Symbiodiniaceae in juvenile R. fulvum (octocoral) across depth

symportal-ansible

Ansible collection for SymPortal