A standardized reference genome resource manager. See the documentation.
refgenie Goto Github PK
Name: Refgenie
Type: Organization
Bio: Standardized assets for reference genomes
Name: Refgenie
Type: Organization
Bio: Standardized assets for reference genomes
A standardized reference genome resource manager. See the documentation.
configuration for an iGenomes refgenieserver
Repository for building bowtie/bowtie2 indexes for refgenie
Information on deployed refgenieserver instances.
Refgenieserver content repository for plant genomes server
recipes & asset classes definitions
A Python object for standardized reference genome assets.
Reference genome resource manager
Documentation for refgenie components
Demo of how to use the refgenie plugin with looper
A demo refgenie plugin
Nextflow plugin for refgenie compatibility
Serves a web interface and RESTful API for reference genome assets.
Primary refgenieserver instance
Python tools for identification and distribution of reference sequences and sequence collections
refgenieserver instance for testing
Implementation of sequence collections
Demo for deploying refgenieserver instance to AWS
A demo for automatic deploy of staging for software testing
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