Comments (2)
Hi Omar,
The links
column is actually only used to store information about 'conflicts'. For NT this is explained further in the handbook. For TP components, it means that a certain TP was found in multiple components. This is fairly rare, but could happen if, for instance, if a certain parent suspect was assigned to multiple features during suspect screening. In hindsight, maybe the name of the links
column wasn't a good choice, especially now with TP componentization.
In any case, the links column is probably not what you are after. Instead, the components tell you which feature groups 'belong' to each other. For NT, each component is a candidate homologous series, while each TP component consists of the TPs for a certain parent. The handbook has more information on inspecting the results, e.g. https://rickhelmus.github.io/patRoon/handbook_bd/inspecting-results.html. The componentInfo()
function can be used to get information on the parents. Furthermore, the reporting functionality can be used to easily get an overview for all of this.
Hopefully this helps a bit ;-)
Thanks,
Rick
from patroon.
Closed due to inactivity, feel free to re-open!
from patroon.
Related Issues (20)
- Error: newProject()/Tp Screening unable to add parent suspect list HOT 5
- Handbook: Inconsistency for labelled Isotopes HOT 1
- Suggestion: 'conc'-column in newProject() HOT 2
- Error: Finding features using XCMS HOT 4
- Using data processing code with already annotated csv file HOT 1
- error with generateCompounds( ) - could not run MetFrag HOT 4
- Error: plotVenn() with featureGroupsComparison HOT 8
- merge generateCompounds from different tools HOT 6
- Swath acquisition HOT 4
- Error: report with compoundsConsensus fails HOT 1
- Report generation occasionally fails HOT 10
- findFeatures Error - Error in if (!recentFFM) settings <- c(settings, `-algorithm:epd:masstrace_snr_filtering` = boolToChr(traceSNRFiltering)) : missing value where TRUE/FALSE needed HOT 4
- MetFrag not functionning with java versions problem being compiled by a more recent version of the Java Runtime (52.0 and 55.0) HOT 1
- MS2Quant: "Error in if (fingerprints != "") { : the condition has length > 1" HOT 2
- Error: Docker RStudio-server, unable to connect to service HOT 2
- Load a previous group features list HOT 2
- Filtering MS/MS Peaks with Characteristic Fragment Ions HOT 5
- Selection of several adducts HOT 3
- Error: graphics device error in Docker HOT 4
- Request: Reduce cache size HOT 2
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from patroon.