rtmalikian/FlagEmbedding
Retrieval and Retrieval-augmented LLMs
Over 20 years of healthcare domain expertise | Clinical AI Architect | Building infrastructure to fix the systemic pain points in healthcare
Repositories
rtmalikian/haystack
Open-source AI orchestration framework for building context-engineered, production-ready LLM applications. Design modular pipelines and agent workflows with explicit control over retrieval, routing, memory, and generation. Built for scalable agents, RAG, multimodal applications, semantic search, and conversational systems.
rtmalikian/OpenOnco
Free, open-source oncology clinical decision support: a deterministic, source-cited rule engine drafts two treatment plans for a clinician to verify — no LLM picks the regimen. Runs offline + as an MCP server for Claude/Cursor. Not a medical device.
rtmalikian/medsci-skills
Agent Skills for medical research — literature search, reporting-guideline & citation checks, statistics, publication figures, submission. Works with Claude Code, Codex, Cursor & GitHub Copilot. Built by a physician-researcher, tested on real publications. MIT.
rtmalikian/fastembed
Fast, Accurate, Lightweight Python library to make State of the Art Embedding
rtmalikian/mem0
The Memory Layer for AI Agents - Drop-in memory infrastructure for AI agents and apps. Context that persists. Built for production.
rtmalikian/tech-house-production-skills
Automated tech house pipeline: MIDI → Roland Fantom-6 → stems → EQ → QC → mastering → MP3. 30 iterations, 4-on-the-floor drums, SysEx automation, A-A-B melodies, reference-optimized. Python.
rtmalikian/Music-of-the-Armenian-Divine-Liturgy
Music of the Armenian Divine Liturgy - Badarak organ MIDI workflow
rtmalikian/clinical-llm-safety-harness
Clinical LLM safety harness: hallucination detection, citation enforcement, safeguarding escalation (self-harm, vulnerable persons) & human-in-the-loop review for healthcare AI startups. FastAPI + Docker.
rtmalikian/claude-mem
Persistent Context Across Sessions for Every Agent – Captures everything your agent does during sessions, compresses it with AI, and injects relevant context back into future sessions. Works with Claude Code, OpenClaw, Codex, Gemini, Hermes, Copilot, OpenCode + More
rtmalikian/headroom
Compress tool outputs, logs, files, and RAG chunks before they reach the LLM. 20% fewer tokens for coding agents, 60-95% fewer tokens for JSON, same answers. Library, proxy, MCP server.
rtmalikian/cognee
Cognee is the open-source AI memory platform for agents. Give your AI agents persistent long-term memory across sessions with a self-hosted knowledge graph engine.
rtmalikian/itsrflxn-tiktok-api
itsrflxn TikTok API app - Terms of Service and Privacy Policy
rtmalikian/ollama
Get up and running with Kimi, GLM, MiniMax, DeepSeek, gpt-oss, Qwen, Gemma and other models.
rtmalikian/llm-swarm
LLM Swarm: Decentralized P2P Pooled Compute Mesh
rtmalikian/future-agi
Open-source, end-to-end platform for evaluating, observing, and improving LLM and AI agent applications. Tracing · Evals · Simulations · Datasets · Gateway · Guardrails. Self-hostable. Apache 2.0.
rtmalikian/medical-clinic-ai-workflow-skills
Atomic medical clinic AI workflow skills for EHR-integrated healthcare administration automation, SMART on FHIR planning, patient intake, prior auth, referrals, scheduling, chart prep, and human-in-the-loop clinic operations.
rtmalikian/weaviate-python-client
A python native client for easy interaction with a Weaviate instance.
rtmalikian/PyHealth
A Deep Learning Python Toolkit for Healthcare Applications.
rtmalikian/qdrant
Qdrant - High-performance, massive-scale Vector Database and Vector Search Engine for the next generation of AI. Also available in the cloud https://cloud.qdrant.io/
rtmalikian/qdrant-client
Python client for Qdrant vector search engine
rtmalikian/lancedb
Developer-friendly OSS embedded retrieval library for multimodal AI. Search More; Manage Less.
rtmalikian/edsnlp
Modular, fast NLP framework, compatible with Pytorch and spaCy, offering tailored support for French clinical notes.
rtmalikian/deepchem
Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology
rtmalikian/CommonDataModel
Definition and DDLs for the OMOP Common Data Model (CDM)
rtmalikian/fedbiomed
A collaborative learning framework for empowering biomedical research
rtmalikian/haw-podcast
Healthcare AI Daily & Weekly Podcasts — RSS feeds, episodes, and artwork
rtmalikian/MONAI
AI Toolkit for Healthcare Imaging
rtmalikian/pydicom
Read, modify and write DICOM files with python code
rtmalikian/nipype
Workflows and interfaces for neuroimaging packages