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bmj_open_rfd_submission

Manuscript for BMJ open submisison

chapter2

chapter 2 of thesis: work in progress

chapter5_clean_analysis

NEw repo for syncing between uni and bc3 and home to finish the analysis for this chapter

cyborg_drum_machine

discharge_stats_rfd

RFD classifier training and testing (for BMJ Open submission)

final_chap_ibm

Code for running and fitting to IBM model (small number of speices, atagonistic only)

gradientmatching

Resources for gradient matching. Synced with Eclipse project files in src of gradientMatching project.

grass_sheep_wolves

Agent based simulation based on the net logo model

habitat-loss-oikos

Implementation the cellular automata model from the Oikos paper (Bascompte)

hl_paper_final

Developing the final version of the HL paper

hlk_analysis_scripts

Python scripts for analysis of habitat loss project (IBM) results

ibm_animations

ibm_mai_model

My adaptation of Miguel Lurgi's agent based model of hybrid mutualistic-antagonistic multi-trophic communities.

interactive_covid_dashboard

Interactive dashboard for tracking COVID-19 patients on ICU at UHB.

lampdriver

Processing driver code for IJP's gnarly 3D-printed lamps (using OPC library).

mimic-code

MIMIC Code Repository: Code shared by the research community for the MIMIC-III database

rankapp

Ranking application for ICU experiment

reveal.js

The HTML Presentation Framework

reveal_presi_mdm_project

reveal_presi_mimic_demo

rfd_board_service_evaluation

sensitivity_analysis

Version of the code ot run sensitivity (no spatial agrrgeation, version taken from Miguel's original)

si_final_hollingii

Final code version for Holling II simulations and parameter estimation (plus range sampling)

sicowe

Presentation for sicowe

simulateode-populations

Eclipse project files for N species ODE simulations. Can specifiy type of functional response and intrisic growth, run using ranodm parameters of those specified in a .parameters file.

species_interactions_final

Ultimate version of code for final chapter

summerproject

UoB_Summer_Project

writeup