s-andrews Goto Github PK
Name: Simon Andrews
Type: User
Company: The Babraham Institute
Location: Cambridge, UK
Simon Andrews's Projects
10xqc
A system for monitoring the quality of 10X single cell data
361division
361 Division - Scientific Training, Education and Learning
autoalign
A web based tool for aligning nanopore PCR fragment sequencing
autoftp
An automated system for creating and managing temporary FTP sites
autosftp
An automated data transfer system
aws_training_images
A set of build scripts to generate AWS instances ready to run our training courses
babrahampublicdata
Scripts to scrape babraham content from the main public repositories
bambrowse
An interactive graphical browser for BAM files
bamqc
Mapped QC analysis program
beatbox
Analysis and visualisation of celluar beating patterns
betterfigure
The code for the 'make a better figure' website
biases
analysis of biases
bilborf
R package for performing differential ORF usage analysis
bioinformaticsrates
A record of bioinformatics hourly rates for core facilities
bioinfschool
A school's project with practical IT, computer science and Bioinformatics components
biothemesearch
A search tool to identify common biological themes amongst a group of researchers
canonicalsplicecount
A program to quantitate RNA-Seq data based on the presence of canonical splice sites
capstone_monitor
A system to monitor activity on the capstone cluster
celllinesleuth
A program to identify human cancer cell lines from NGS data
cgidemo
An example structure of a python CGI application
charades
An online system for playing charades
christmas2020
The Babraham Bioinformatics 2020 Xmas Card
clusterflow
A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.
clusterstorage
A web front end which allows cluster users to see what they're storing
codonuse
A program to calculate how unusual the codon usage of a sequence is
collabgraph
An interactive graph of academic collaborations
compter
An application to graphically summarise kmer enrichment in a set of sequences
conclave
A data integration application for genomics
coursedb
A database system for managing training course bookings
cycledb
A searchable web database of cycle rides
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