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Saeed Ahmed's Projects

ilearn icon ilearn

iLearn, a Python Toolkit and Web Server Integrating the Functionality of Feature Calculation, Extraction, Clustering, Feature Selection, Feature Normalization, Dimension Reduction and Model Construction for Classification, Best Model Selection, Ensemble Learning and Result Visualization for DNA, RNA and Protein Sequences.

lmpred_amp_prediction icon lmpred_amp_prediction

A novel approach to the classification of antimicrobial peptides (AMPs) using pre-trained language models to create contextual vectorized embeddings of each peptide sequence before a convolutional neural network is used as the classifier.

msbert-promoter icon msbert-promoter

A multi-scale ensemble predictor based on BERT pre-trained model for the two-stage prediction of DNA promoters and their strengths

preaodp icon preaodp

PredAoDp: Accurate Identification of Antioxidant Proteins by Fusing Two Different Descriptors Based on Evolutionary Information with Support vector machine

shap icon shap

A game theoretic approach to explain the output of any machine learning model.

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