sandertan Goto Github PK
Name: Sander Tan
Type: User
Company: Research & Data Technology, UMC Utrecht
Bio: Data engineer at UMC Utrecht. Building healthcare NLP applications for production.
Location: Utrecht
Name: Sander Tan
Type: User
Company: Research & Data Technology, UMC Utrecht
Bio: Data engineer at UMC Utrecht. Building healthcare NLP applications for production.
Location: Utrecht
cBioPortal for Cancer Genomics
Context to create cBioPortal docker images
Example commands and portal info for demo purposes
Scripts that calculate GSVA scores for cBioPortal expression files
Code to transform all clinical data for TCGA Pan Cancer studies to cBioPortal format
Building data processing pipelines for documents processing with NLP using Apache NiFi and related services
Programming with Python for Data Science Microsoft
The Metadata Platform for the Modern Data Stack
The Leek group guide to data sharing
DEAPP shiny App
Deduce: de-identification method for Dutch medical text
Open source text annotation tool for machine learning practitioner.
Dockerfile to create a container with GISTIC2 (2.0.23)
Easy to maintain open source documentation websites.
Example repo with capital letter in name to reproduce bug in PIP
Setup for creating a gistic docker container
Always know what to expect from your data.
Scipts and (some) data from GSVA analysis performed
Lightweight Razer Peripheral Initialization
Demonstration of Microsoft SQL Server on Linux in a Docker container with creating example database after initialization.
Mutation Frequency Dashboard to display how often specific genes are mutated among different types of cancers in patients that are profiled in the TCGA PanCancer project.
Speedml Python Notebooks
System for Medical Concept Extraction and Linking
Roslin is a portable and reproducible workflow infrastructure for Cancer Genomic Sequencing Analysis
A full spaCy pipeline and models for scientific/biomedical documents.
UMLS to PostgreSQL with PgAdmin
Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.