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adafilter

ajive_project

This repository provides the AJIVE software in Matlab and all related Matlab scripts to reproduce the results in the paper Angle-basied Joint And Individual Variation Explained (Feng et.al., 2018). Please refer to README.md for instruction.

awesome-multi-omics

List of software packages for multi-omics analysis

bidifac

Bidimensional matrix factorization

cause

R package for CAUSE

causesims

R package for creating simulated summary statistics and testing MR methods

d-cca

A Decomposition-based Canonical Correlation Analysis for High-dimensional Datasets (JASA-20 paper)

ebnm

R package to fit Empirical Bayes Normal Means model.

ecca

freebird

gsknockoff

high-dimensional-mediation-analysis

High-dimensional mediation analysis for selecting DNA methylation Loci mediating childhood trauma and cortisol stress reactivity

hnn_paper

Codes used for numerical studies and real data analysis in the paper "Hierarchical nuclear norm penalization for multi-view data integration"

inmf

Source code for integrative nonnegative matrix factorization

ipca

Integrated Principal Components Analysis

mr.corr2

mr.cue

mr.pivw

mr_comparison_simulations

mraid

mrbee

Mendelian Randomization with Bias-corrected Estimating Equations

mrci

mrcip

mrcml

R Package applying MRcML methods.

mrmix

R package for performing Mendelian Randomization using mixture models

r.jive

:exclamation: This is a read-only mirror of the CRAN R package repository. r.jive — Perform JIVE Decomposition for Multi-Source Data

replicability

slide

R package SLIDE for Structural Learning and Integrative Decomposition of Multi-View Data

ssa

simultaneous signal analysis