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mephenor avatar mephenor commented on May 29, 2024
  • assigned_to: nobody --> niko-rodrigue

Original comment by: niko-rodrigue

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mephenor avatar mephenor commented on May 29, 2024

This makes sense, however, in some cases it can and should be avoided. For instance, the SBO number must be greater than 0 and less than 999999. At the moment - and this is also the case in libSBML - an unset SBO number can be recognized because it obtains the value -1. Shouldn't we make use of similar approaches in other cases where this is possible?

Original comment by: draeger

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mephenor avatar mephenor commented on May 29, 2024

FYI: At present in libsbml I am working on using templates for all attributes so that each attribute stores

value
default value
isSetValue

where value/default value are of whichever type is appropriate and isSetValue is a boolean indicating whether the value has been set by the user or by default

This has been a big issue with users resulting friom the fact that SBML L3 removes default values

Original comment by: sarahkeating

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mephenor avatar mephenor commented on May 29, 2024
  • status: open --> closed

Original comment by: niko-rodrigue

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mephenor avatar mephenor commented on May 29, 2024

Issue as been discussed on the jsbml-list, resolved and implemented.

Original comment by: niko-rodrigue

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