schlegelp Goto Github PK
Name: Philipp Schlegel
Type: User
Company: University of Cambridge
Bio: postdoc working on neurons, circuits and connectomes; 🐘 @[email protected]
Philipp Schlegel's Projects
aann
All nearest-neighbor search using Delaunay graphs
badges
:flower_playing_cards: Readme Badges – Gotta catch 'em all
biorxiv-latex-template
LaTeX template to create a compiled PDF (text+figures) e.g. for bioRxiv.org
brainmappy
Python tools to interact with Google brainmaps API
catheat
Plot categorical heatmaps with seaborn
catmaid
Collaborative Annotation Toolkit for Massive Amounts of Image Data
catmaid-to-blender
Plugin for Blender to interface with CATMAID Server and Pull Data
clio-py
Python client for clio-store
cloudblender
Blender wrapper for cloud-volume
connectomics-vis-survey.github.io
Resources for the EuroVis 2022 survey paper on Visualization and Analysis in High-Resolutiuon Connectomics
distframe
A DataFrame-like wrapper around condensed distance matrices.
door.data
R package containing the data for the Database of Odor Responses
emannotationschemas
Repository to hold schemas for annotations of volumetric imaging data focused on EM
fastcore-rs
Reimplementation of navis functions in Rust.
fitbit-python
A Python library to query your Fitbit data.
jupytext
Jupyter Notebooks as Markdown Documents, Julia, Python or R scripts
mlx-nn
Brute force nearest-neighbour lookup for Apple silicon
nat.hdf5
Playground for reading neuron data from HDF into nat
nblast-knn
Playground for tinkering with improving KNN for NBLAST
neuprint-python
Python client utilties for interacting with the neuPrint connectome analysis service
neuroglancer
WebGL-based viewer for volumetric data
nglscenes
Generate and manipulate neuroglancer scenes
octarine
A fast, lightweight 3D viewer for Python based on WGPU
pyfim
Python package for analysis of FIMTrack data
pygfx
A python render engine running on wgpu.
sea-serpent
A dataframe-like wrapper around the seatable API.
shull
S-Hull Delaunay triangulation implemented in Rust (with Python bindings)
tanglegram
Plot tanglegrams from two dendrograms
vispy
Main repository for Vispy
xform
A package to transform spatial data from one space to another.
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