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Name: Anni
Type: User
Company: Rockefeller & Cornell University
Bio: Bioinformatics & Biostatistics @casanova-lab @rladies-nyc
Location: New York City
Name: Anni
Type: User
Company: Rockefeller & Cornell University
Bio: Bioinformatics & Biostatistics @casanova-lab @rladies-nyc
Location: New York City
Data for and description of the ACIC 2023 data competition
An R-Package to estimate and plot confounder-adjusted survival curves (single event survival data) and confounder-adjusted cumulative incidence functions (data with competing risks) using various methods.
Public repository containing materials used in the Deep Convolutional Neural Networks article
Public repository containing materials used in the Undercomplete AutoEncoder article
This repository contains the code to run the ASCETS arm-level copy number events caller for targeted sequencing data. ASCETS produces arm-level copy-number variant calls and arm-level weighted average log2 segment means from segmented copy number data.
ENCODE ATAC-seq pipeline
A collection of resources regarding the interplay between differential equations, deep learning, dynamical systems, control and numerical methods.
Bioconductor package "ballgown", devel version. Isoform-level differential expression analysis in R.
A fast and sensitive gapped read aligner
Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
Analyze code's readability (e.g., point out when a function is getting too long or even if the code is confusing in spots)
A cross-platform command-line utility that creates projects from cookiecutters (project templates), e.g. Python package projects, C projects.
A logical, reasonably standardized, but flexible project structure for doing and sharing data science work.
A repository for sharing information on available COVID-19 RNA-Seq datasets
SQL database, Cloudant NoSQL database, LeetCode materials
Repository for Short Course: Deep Learning in Omics
Deep Hidden Physics Models: Deep Learning of Nonlinear Partial Differential Equations
A collaboratively written review paper on deep learning, genomics, and precision medicine
An R package to plot and calculate statistics of payments by Diagnosis Related Group code.
A Tool to Annotate and Prioritize Exome Variants
An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
Official code repository for GATK versions 4 and up
Detecting sites of genomic enrichment
Gene Set Enrichment Analysis in Python
This is the bioinformatics knowledgebase from Harvard Chan Bioinformatics Core
High dimensional weighted gene co-expression network analysis
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.