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Samuel Genheden's Projects

auto-crop icon auto-crop

Tool to automatically crop images based on shapes

auto_martini icon auto_martini

Automatic MARTINI parametrization of small organic molecules

deepchem icon deepchem

Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology

disk_usage icon disk_usage

Instruction on usage of common storage disk and backup

elba icon elba

Blogging and tutorials on how to setup, run and analyse simulations with the Elba and Elba/AA force fields

elbatools icon elbatools

Tools to parameterize, setup and analyse simulations with the ELBA force field

figgy icon figgy

A Tetris-like game with pygame zero

ired icon ired

Scripts to perform iRED analysis with Amber

lammps icon lammps

Public/backup repository of the lammps source

linear_logp icon linear_logp

A linear model of water/octanol partition coefficients

ml-playground icon ml-playground

A library that wraps most common usage of scikit-learn for building simple ML models

notebooks icon notebooks

Notebooks on various topics, mostly for blog posts

paramelba icon paramelba

Set of tools to parameterise the molecules for the ELBA force field

parmed icon parmed

Parameter/topology editor and molecular simulator

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