Related Issues (20)
- Refactor docs build infrastructure
- Restructure vcf2zarr docs
- Add --no-progress (or similar) to suppress progress
- Bug in dexplode-partition
- Change dexplode-init to use ``--num-parts``/``-n`` instead of positional HOT 1
- Change dencode-init to use --num-partitions
- Hypothesis testing for vcf2zarr HOT 13
- Pin to zarr < 3
- ValueError: could not broadcast input array
- Run tests against Zarr 3 HOT 13
- Run tests against numpy 2 HOT 4
- Set copy=True in np.array creation for numpy 2.0 compatibility HOT 1
- ICF stores created with numpy 1.x won't work with numpy 2.x HOT 1
- Optional first phasing symbol introduced in VCF 4.4 HOT 4
- Parsing fails for VCF with GT in header but not in FORMAT field HOT 1
- Char fields added as Unicode not string HOT 1
- Numcodecs v0.13.0 causing test failures HOT 1
- Inspect fails for datasets with out consolidated metadata
- LPL no smaller than PL HOT 10
- Add variant length/end coordinate field HOT 2
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