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b-soid

Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with supervised classification to achieve fast predictions of behaviors that are not predefined by users.

baslerpi

Repository for a Python convenience wrapper around the pypylon module to interact with Basler cameras

behavr

Data structure to store and manipulate high throughput behavioural data in R

confapp

This package manage configurations files using a singleton.

cv2cuda

damr

Read TriKinetics' DAM data in R

deepethogram

deepethogram_vsc

deeplabcut-live-gui

GUI to run DeepLabCut on live video feed

detetctingactionstarts

Detecting the starting frame of actions in video.

dropbox-api-content-hasher

Code to compute the Dropbox API's "content_hash"

dropy

esquisse

ethoscope

ethoscope-imager

ethoscopy

fictrac

FicTrac: A webcam-based method for tracking spherical motion and generating fictive animal paths.

flyhostel

flyhosteldocs

fslretho

GUI to the Rethomics suite for easy interpretation of ethoscope and DAM datasets

ggetho

Visualise high throughput behavioural data in R, based on ggplot2

idoc_docs

idocr

R package to analyze data produced in IDOC

idtrackerai

Fork of https://gitlab.com/polavieja_lab/idtrackerai

idtrackerai-app

Fork of https://gitlab.com/polavieja_lab/idtrackerai-app

idtrackerai_vsc

idvalidator

imgstore

Store for video frames and metadata. Seekable & scaleable

long-timescale-analysis

midline-detector

Find a midline in a segmented picture