sharpton Goto Github PK
Name: Thomas Sharpton
Type: User
Company: Oregon State University
Blog: http://lab.sharpton.org
Name: Thomas Sharpton
Type: User
Company: Oregon State University
Blog: http://lab.sharpton.org
A QC pipeline for shotgun metagenomic data derived from host-associated microbial communities (i.e., microbiomes)
Provides a local database of in-house and published genomes for Bacteria and Archaea from NCBI
PhylOTU identifies microbial OTUs from metagenomic data
Phylogenetic placement tool
Conducts a quick and dirty classification of DNA sequences into protein families. Takes demultiplexed Illumina fastq data, organizes it into sample categories, pushes the data to an SGE cluster, process it with LAST using a precomputed protein family database, and parses the result to identify the number of copies of each family in each sample.
scripts sequence and feature conversion, annotation, analysis ...
Code and versioning notes for the Sfams protein families.
A high-throughput and modular workflow to quality control shotgun metagenomic DNA sequence libraries
A Shotgun Metagenome Annotation Pipeline
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
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Data-Driven Documents codes.
China tencent open source team.