sib-swiss Goto Github PK

2016-06-20-lausanne

Software carpentry training material. Date of event: 20/21 June 2016

2017-10-longreads-training

advanced-statistics

Webpage for SIB's advanced statistics course

aws-docker

Set of commands to deploy docker containers on an AWS instance

beat_dkd

biodiversity-bioinformatics

Course website "Biodiversity bioinformatics: from large-scale phylogenomics to gene families and functions"

consensusopls

containers-introduction-training

Course website "Docker and Singularity for reproducible research: getting started with containers"

containers-snakemake-training

Course website "Introduction to Containers and Snakemake for Reproducible Research"

course_template

a template for SIB-training course repository (when there is no website attached, otherwise go to https://github.com/sib-swiss/course_website_template )

course_website_template

Template to generate course websites in template

data-analysis-in-practice

dbc454

unbiased parallel density based clustering of large scale ITS data

dh-bobbiensis

This GitHub webpage describes the BOBBIENSIS Web Application, that has been created with the support of the SNSF MARK16 by Silvano Aldà (IT Developer, SIB), under the lead of Claire Clivaz (PI) and the collaboration of Elisa Nury (DH+, SIB). It reuses parts of the SNSF MARK16 API (https://github.com/sib-swiss/dh-mr-mark16).

dh-cpa

The authors of the CPA DM font are Alain J. Desreumaux (CNRS, Paris, FR) and Tim Meylan (Professor of Typography, HEVS, Sierre, CH). Font Engineering and mastering : Alphabet Type (Berlin, DE). With Jérémy Formaz (Forme.ch, Sion, CH), under the lead of Claire Clivaz (SIB, CH). Author of theCPA DM KeymanWeb: Silvano Aldà (SIB, CH).

dh-dataviz

This Github webpage describes the SNSF MARK16 Dataviz API. It has been developed by Elisa Nury, in collaboration with Silvano Aldà and Claire Clivaz (PI), from Peripleo (Pelagios Network, https://pelagios.org). See https://dataviz-mark16.sib.swiss.

dh-humarec-webbook

dh-mr-mark16

This Github webpage describes the SNSF MARK16 Manuscript Room API (https://mr-mark16.sib.swiss). It has been updated in this June 2023 by Silvano Aldà (Core-IT, SIB) based on a first code written by Jonathan Barda (Core-IT, SIB). MARK16 (2018-2023) has been led by Claire Clivaz (PI) with Mina Monier, Elisa Nury and Priscille Marschall (DH+, SIB).

docker-rock

dotlet

Compare biological sequences by the diagonal plot method

dsmip

MIP/Datashield integration

dsmo

dsquerylibrary

dsquerylibraryserver

dsresource

dsrest

datashield REST interface

dsswissknife

dsswissknife-example

dsswissknifeclient

easybuild-easyconfigs

A collection of easyconfig files that describe which software to build using which build options with EasyBuild.