sirxqyang Goto Github PK
Name: Xiaoqin Yang
Type: User
Company: Soochow University
Location: Suzhou, China
Xiaoqin Yang's Projects
autobowtie
bowtie processing for all the fastq files in a folder
autolimma
test suit for code management of large project
automacs
run macs automatically
average_profile
average profile for nucleosome positioning data
bindingsite
the project for detecting the TF binding site as exactly as the ChIP-exo
chipmacs
this script was developed to execute macs and bedtool command.
enhancer_project
source code for data analysis of enhancer project
id_change
change gene id, symbol and so on.
intercept_waveforms
An easy and sensitive method for narrow peak detection. The original method comes from “Lu, W., et al. (2006). A semi-automatic method for peak and valley detection in free-breathing respiratory waveforms. Medical Physics, 33(10), 3634–3636.” And I implemented this method into Python code.
programmingassignment2
Repository for Programming Assignment 2 for R Programming on Coursera
promoter_region
get all promoter region from TSS genome
python.el
Python's flying circus support for Emacs
sirxqyang.github.io
my homepage
three_positioning
three_positioning for preliminary analysis of nucleosome positioning
vimrc
my vimrc setting
wbb
transformation for bed bam and wig files
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