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aligndb

Analyze the relationship between indels and substitutions in genomes

alt-splice

alternative splicing detection based on RNA-seq datasets

app-fasops

Operating blocked fasta files

bio-eutilities

Low-level OO Perl interface for NCBI's eutils

book

ega

Easy Genome Aligner

ega-tutorial

This is a detailed introduction for EGA users to get a quick start.

egavm

Vagrant boxes for EGA.

egaz

Full UCSC multiple genome alignments procedure

faops

Operate fasta files

fig_table

Create figs and tables from excel files. Mainly works on Windows.

isoseq_sa3nup

Documentation and Developers Code Base for Iso-Seq SMRTAnalysis 3.x and beyond

phylogeny-determined-by-domain

it's a task to explore

plenv

Perl binary manager

rnaseq_tutorial

Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.

siyue1226.github.io

teaching

Code and files used in teaching and training courses.

try

have a try

widespread-natural-variation-of-dna-methylation-within-angiosperms

Data and scripts for Widespread natural variation of DNA methylation within angiosperms

withncbi

Batch operation according to NCBI taxonomy database.

ztpg

A software Package to Assembly ring-shaped genome