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3dmetrictools

3DMeshMetric is a visualization tool that computes and displays surface-to-surface distance between two triangle meshes using user-specified uniform sampling (based on the source code of MeshValmet: http://www.nitrc.org/projects/meshvalmet).

brainstools

A suite of tools for medical image processing focused on brain analysis

cmake-findfortran

Finds a fortran compiler, support libraries and companion C/CXX compilers if any.

content

A repository to host some public content pages

customappscripts

Experimental dashboard scripts for SlicerCustomAppTemplate

dashboardscripts

Collection of scripts used to configure/build/test/package 3D Slicer and associated extensions

dockbuild

Compiling environments in Docker images.

extensionsindex

Slicer extensions index

intersonarraysdkcxx

C++ Wrapper for the C# SDK for Interson's Linear Array Probe

itk

Insight Toolkit (ITK) -- Official Repository

itkstrain

mecademicscripts

mfsda_python

Multivariate Functional Shape Data Analysis in Python (MFSDA_Python) is a Python based package for statistical shape analysis. A multivariate varying coefficient model is introduced to build the association between the multivariate shape measurements and demographic information and other clinical, biological variables. Statistical inference, i.e., hypothesis testing, is also included in this package, which can be used in investigating whether some covariates of interest are significantly associated with the shape information. The hypothesis testing results are further used in clustering based analysis, i.e., significant suregion detection. This MFSDA package is developed by Chao Huang and Hongtu Zhu from the BIG-S2 lab.

openigtlinkio

Library for interfacing to openigtlink/OpenIGTLink, dependent on VTK and Qt. Based on openigtlink/OpenIGTLinkIF

osteotomyplanner

pkmodeling

Slicer Extension providing pharmacokinetic modeling

plusbuild

CMake scripts for building Plus library, applications, and all required dependencies

pluslib

Plus is an open-source software toolkit for data acquisition, pre-processing, and calibration for navigated image-guided interventions.

pluslibdata

Data file storage repository for Plus library.

portplacementv2

A 3DSlicer extension for assisting with surgical port placement

projectweek

Website for NA-MIC Project Weeks

qt-easy-build

Scripts allowing to easily build Qt with OpenSSL support on Linux, MacOSX or Windows

qt-material

Material inspired stylesheet for PySide2, PySide6, PyQt5 and PyQt6

scikit-ci-addons

Command line tool and a set of scripts useful to help drive CI

sequences

Repository to host Sequences (formerly MultidimData) extension

serial

Cross-platform, Serial Port library written in C++

shaperegressionextension

Computation and visualization of time-regressed shapes in a collection of 3D shape inputs associated to a linear variable

shapevariationanalyzer

Shape modeling and classification, extract shape features

slicer

Multi-platform, free open source software for visualization and image computing.

slicer4-download