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10-steps-to-become-a-data-scientist

📢 Ready to learn! you will learn 10 skills as data scientist:📚 Machine Learning, Deep Learning, Data Cleaning, EDA, Learn Python, Learn python packages such as Numpy, Pandas, Seaborn, Matplotlib, Plotly, Tensorfolw, Theano...., Linear Algebra, Big Data, Analysis Tools and solve some real problems such as predict house prices.

africanbiogenomeproject

bactaxr

Bacterial taxonomy construction and evaluation in R

bagep

A pipeline for Bacterial Whole genome sequence data analysis

bioinformatics-workbook

Bioinformatics Workbook repository

bioinformatics_freecodecamp

btkcourse

busco_phylogenomics

Utility script to construct species phylogenies using BUSCO results

buscomp

BUSCOMP: BUSCO Compiler and Comparison tool

buscoorthophylo

Wrapper script to concatenate, align, and construct phylogenetic trees of BUSCOs

chromsyn

Chromosome-level synteny plotting using orthologous regions

cog

Scripts and steps for making a consolidated COG database file for tools like DIAMOND.

computationalgenomicsmanual

Robs manual for the computational genomics and bioinformatics class.

dsolani_hgt_paper.md

edirect_scripts

foa_scripts_2023

foec

Fusarium oxysporum effector clustering (FoEC) is a pipeline to identify candidate effector genes in a set of F. oxysporum genomes and apply hierarchical clustering on the presence-absence pattern of these genes.

funannotate

Eukaryotic Genome Annotation Pipeline

funfinder_pangenome

Data analysis of Funannotate and Orthofinder outputs to Pangenome results

genespace

genotype_plot

A set of functions to visualise genotypes based on a VCF

get_homologues

GET_HOMOLOGUES: a versatile software package for pan-genome analysis

h3abionet-sops

Standard operating procedures for H3ABionet data processing and analyses

hybpiper

Recovering genes from targeted sequence capture data

insect_genome_assemblies

scripts used to download and analyze insect assemblies from GenBank

irida-galaxy-deploy

:whale: Deploying IRIDA and Galaxy all in one server/VM using Docker or Terraform

iwc

Intergalactic Workflow Commission

kraken-protocol

Metagenome analysis using the Kraken software suite

masterbiogeno

metagenomics