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bcriskpathways

bcsp

bio_image_colorblindness

Evaluation of the use of colorblind-unfriendly images in biology-related journal articles

bsaseq_cwl

bsaseq_pipeline_docker

chatgpt_bioinformatics

Data and code from "Many bioinformatics programming tasks can be automated with ChatGPT"

chorion_demo

Let's demonstrate how Docker containers can be used for storing and sharing data

codebuddy

CodeBuddy: A programming assignment management system for short-form exercises

colorblind_image_tester

This Web application enables biologists whether images are "friendly" to people with deuteranopia, the most common form of red/green colorblindness.

confounded

confounded_analysis

confounded_paper

course_resources

datastoragetests

expressionable

Transform, query, and merge tabular files with the expressionable Python module. This tool is used primarily for gene-expression data.

expressionable-cli

Transform, query, and merge tabular files with the expressionable command-line tool. This tool is used primarily for gene-expression data.

f4

Python module to build and query Fast Fixed-width File Format (F4) files

f4py

A Python package for the Fast Fixed-width File Format (F4)

geney

Geney: a web-based tool to make your data wishes come true!

geo_nlp

geofinder

getl

goodnomen

Good Nomen: A web-based tool for mapping biomedical data to reference terminologies

gsoa

makedown

makedown_code

ml-flex

pae

Example of a Portable Analytical Environment

pae_analysis

parallelsomaticvariantcalling