Comments (1)
In case of the tmalign alignment type (--alignment-type 1
) we sort the results by the TMscore normalized by query length. We write the TMscore into the e-value(=TMscore) as well as into the score(=TMscore*100) field.
from foldseek.
Related Issues (20)
- Can I search for similar protein structures to those in my query database and pick out representative based on clustering?
- Unable to cluster large set of similar proteins HOT 7
- TM-score reported in the HTML is different from the one in the tabular output
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from foldseek.