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St. Jude Children's Research Hospital BioHackathon's Projects

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St. Jude BioHackathon Overview Page

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Hackathon Evaluation Analysis of Recombination Deficiency

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SCCRIP (Sickle Cell Clinical Research and Intervention Program) established a longitudinal cohort at multiple sites with Sickle Cell Disease (SCD) in 2014 managed by St. Jude Clinical Hematology. A new collaborator for SCCRIP has longitudinal data for 600 SCD patients in OMOP CDM format and this effort is to convert OMOP CDM to SCCRIP format.

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A methylation array analysis pipeline tailored for discovering rare methylation events with interactive data visualization

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Peak calling optimization via real time results assessment and interactive parameter adjustment.

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A Single app to upload CSV files, analyze, visualize and share data powered by agnostic and flexible database which can handle relational tables in any format.

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