Comments (4)
Thanks for pointing this out to me. It's a bug in parsing integer arguments that does not only affect -U. I will release a fix soon.
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Hi Matt,
The new release is out. It should fix this issue.
Regards,
Sebastian
from arriba.
Hey thanks good to know the feedback was useful, will test new release.
All the best,
Matt
from arriba.
Closing this as solved. Thanks again for the hint!
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Related Issues (20)
- recommanded way to make custom blackfile HOT 2
- Potentially truncated fastq? HOT 1
- Fusion pdf output "No coding regions due to antisense transcription" HOT 2
- Invalid file when converting fusions to vcf HOT 1
- Does Arriba do reads downsampling by default? HOT 8
- std::out_of_range error HOT 18
- no split reads or discordant mates found HOT 7
- Gene annotation HOT 1
- Different gene fusions from the same alignments HOT 2
- On the classification of the results about the fusion_transcript HOT 4
- Failed to read BGZF block data at offset HOT 5
- How to calculate fusion gene expression? HOT 8
- Aligned.out.bam file empty HOT 13
- General question about breakpoints HOT 1
- Low number of structural variants HOT 4
- e-value threshold HOT 2
- possibly incorrect determination of the frame HOT 5
- EOF marker is absent. The input may be truncated HOT 1
- Error downloading reference data HOT 3
- How breakpoints should be interpreted on doubled 5' transcript end gene-fusions? HOT 2
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