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.tmux

🇫🇷 Oh My Tmux! Pretty & versatile tmux configuration made with ❤️

100-days-of-ml-code

100 Days of ML Coding

2018-paper-spacegraphcats

Paper text and pipeline for "Exploring neighborhoods in large metagenome assembly graphs..."

2021-ggg298

Winter 2021, GGG 298 - Tools for Data Intensive Research - UC Davis

2022-ggg201b-lab

GGG 201(b), Intro to Bioinformatics - lab section. Winter 2022 at UC Davis.

2022-ggg298

Winter 2022 - Tools for Data Intensive Research at UC Davis.

angsd-snakemake

Example snakemake repo for NGS analysis pipeline

assemble_pipeline

Assemble and following pipeline used in wisent genome paper.

assembling-complete-mt-genome

This repository contains tools for an automated assembly of the complete mitochondrial DNA from Illumina NGS data

awesome-bioinformatics

A curated list of awesome Bioinformatics libraries and software.

awesome-pipeline

A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin

bayesian-computation-with-r

Answers and notes for the book Bayesian Computation with R by Jim Albert

bayesian_stats_tutorials

bayesianinference_practicals

bio395_2020

Instructions for 2020 version of BIO395 course

biol525d

Course material for UBC Biol525D

biol610

intro to programming for IE2 evolution students

biotools

Standalone scripts that are useful for manipulating and analysing DNA sequence data

cc-linear-mixed-models

Introduction to linear mixed models

chopper

chopper -- an R package to manipulate DNA alignments and data preparation for phylogenetic analyses

circosplots

Scripts to generate circos plots

coding_excercises

A public repo of coding exercises

dartr

Importing and Analysing DArT type snp and silicodart data

dartrworkshop

dataviz-book

"Data Visualization: charts, maps and interactive graphics" (the making of)

directlabels

Direct labels for multicolor plots in lattice or ggplot2

dracula-theme

🧛🏻‍♂️ Dark theme for all the things!

eclip

eCLIP sequencing data pipeline

emdbook

R package for support of Bolker 2008 Ecological Models and Data

evol2019

Code for analyses presented at Evolution 2019