sustainscapes Goto Github PK

aiccperm

This package streamlines model selection and averaging of PerMANOVA using AICc and information-theoretic principles. Based on the approach by Burnham and Anderson, it provides a workflow for comparing models, obtaining weights, and summarizing results.

aiccpermanova

It documents a study evaluating models for plant and bacterial communities in Denmark, including code for generating and fitting models for presence-absence and abundance data. AICc is used to evaluate the models, and results are summarized in a table.

artscore

The Artscore package calculates biodiversity measures, including Artscore, Strukturindeks, and Naturtilstandindeks. It provides functions to get weights and subweights, retrieve available habitats and species, and compute natural condition and Strukturindeks values.

dataforirina

dockerjonathan

DockerJonathan is a reproducible way to use the RFate package without breaking it. It provides a Docker file and manual to run RFate using a password in Rstudio server. Windows users can also use Docker.

ecogenetics_site_selection

NewSites is an R repo that generates experimental and survey plots in Kattrup. It involves loading required R packages, layers, and outlines, transforming built areas into binary layers, generating a grid of points, checking percentage of area around the points, and adding constraints.

eva

R script to map Ellenberg's indicator values to plant species.

fieldsheetstructure

This package simplifies the process of cleaning fieldwork data sheets by providing a function for reading and organizing data from Excel sheets. It supports different sheet types, including Husby and Sinks, and can run in parallel to save time. The resulting output is a clean and structured dataframe.

floraexam

Shiny app for studying danish flora and vegetation

geostratr

Simple stratification of spatial patterns

klimaskovfond

landusehanneproblem

metadatapres

Repoducibility and metadata presentation

mostcommonspecies

sdmworkflows

Package for downloading, cleaning coordinates, and modeling sdms

sustainscapes.github.io

Generates website for sustainscapes including interactive maps, classes and packages

targets_vilhelmsborg_community

troublemaker

This package automates the generation of .dat files for 'AMPL' software from spatial data, streamlining optimization workflows. Supports different spatial data formats and problem types. Published methods by Fourer et al. (doi:10.1287/mnsc.36.5.519). License: GPL (>= 3).

vilhemsborg_diversity_metrics